STRINGSTRING
Noca_3120 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3120" - Response regulator receiver in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3120Response regulator receiver (212 aa)    
Predicted Functional Partners:
Noca_3119
ATPase domain-containing protein (535 aa)
 
 
  0.986
Noca_1019
Histidine kinase, dimerisation and phosphoacceptor region (392 aa)
 
  0.915
Noca_2634
ATPase domain-containing protein (434 aa)
 
 
  0.914
Noca_2942
ATPase domain-containing protein (485 aa)
 
 
  0.905
Noca_3118
Type II secretion system protein (304 aa)
              0.870
Noca_3117
Type II secretion system protein (326 aa)
              0.863
Noca_0994
GAF domain-containing protein (577 aa)
 
 
  0.857
Noca_0946
GAF domain-containing protein (536 aa)
 
 
  0.857
Noca_3116
Type II secretion system protein E (491 aa)
              0.811
Noca_3115
Flp pilus assembly protein ATPase CpaE-like (395 aa)
              0.796
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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