STRINGSTRING
Noca_3132 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3132" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3132Hypothetical protein (139 aa)    
Predicted Functional Partners:
Noca_2855
PAS/PAC sensor signal transduction histidine kinase (712 aa)
   
 
  0.992
Noca_2895
GAF sensor signal transduction histidine kinase (539 aa)
   
 
  0.982
Noca_3604
ATPase domain-containing protein (742 aa)
   
 
  0.932
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (341 aa)
              0.911
Noca_3133
Hypothetical protein (328 aa)
              0.828
Noca_0746
Flagellar motor switch protein FliM (335 aa)
   
 
  0.800
Noca_0529
NADH dehydrogenase subunit J (275 aa)
 
   
  0.791
Noca_4562
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase (736 aa)
   
  0.788
Noca_2854
3-hydroxyacyl-CoA dehydrogenase (696 aa)
   
  0.788
Noca_3134
Cytochrome c oxidase subunit III (215 aa)
   
   
  0.777
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (8%) [HD]