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Noca_3143 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3143" - SirA family protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3143SirA family protein (82 aa)    
Predicted Functional Partners:
Noca_3142
Cysteine desulfurase (379 aa)
   
  0.997
Noca_3446
Class V aminotransferase (399 aa)
   
  0.994
Noca_2600
uroporphyrinogen-III C-methyltransferase (407 aa)
 
   
  0.987
Noca_0496
uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase (552 aa)
       
    0.980
Noca_3409
Precorrin-3 methyltransferase / precorrin-2 C20-methyltransferase (526 aa)
       
    0.968
Noca_2892
Precorrin-3 methyltransferase / precorrin-2 C20-methyltransferase (507 aa)
       
    0.968
rsmI
uroporphyrin-III C/tetrapyrrole methyltransferase; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (280 aa)
   
   
    0.951
Noca_3809
Type III restriction enzyme, res subunit (1033 aa)
   
 
      0.920
Noca_2932
SirA family protein (77 aa)
   
   
 
0.905
Noca_2931
Putative NADH dehydrogenase (166 aa)
 
   
  0.645
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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