STRINGSTRING
Noca_3150 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3150" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3150Hypothetical protein (192 aa)    
Predicted Functional Partners:
htpX
Heat shock protein HtpX (309 aa)
 
          0.975
Noca_3152
PspA/IM30 family protein (260 aa)
 
          0.949
Noca_1412
Glycosyl transferase family protein (951 aa)
   
          0.740
Noca_2458
Hypothetical protein (175 aa)
   
          0.653
Noca_3153
Integral membrane protein (194 aa)
 
          0.605
Noca_1413
Hypothetical protein (475 aa)
   
          0.603
Noca_2827
Hypothetical protein (186 aa)
   
          0.591
Noca_2637
Peptidase M50 (378 aa)
   
          0.537
Noca_2453
Hypothetical protein (165 aa)
   
          0.521
Noca_1787
Hypothetical protein (255 aa)
   
          0.512
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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