STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3150KEGG: sco:SCO2203 hypothetical protein. (192 aa)    
Predicted Functional Partners:
Noca_3152
PFAM: PspA/IM30 family protein; KEGG: sco:SCO2168 putative phage shock protein A.
 
     0.930
htpX
Heat shock protein, Metallo peptidase, MEROPS family M48B; PFAM: peptidase M48, Ste24p; KEGG: fra:Francci3_2230 peptidase M48, Ste24p; Belongs to the peptidase M48B family.
 
     0.929
Noca_1787
KEGG: tfu:Tfu_2558 hypothetical protein.
  
     0.594
Noca_2457
KEGG: tfu:Tfu_1823 hypothetical protein.
  
     0.534
Noca_3153
KEGG: sco:SCO2169 integral membrane protein.
       0.523
Noca_2946
KEGG: sco:SCO5843 hypothetical protein.
  
     0.436
Noca_2958
KEGG: sma:SAV2442 putative a subunit of topoisomerase IV; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II.
  
     0.435
Noca_3481
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sco:SCO2624 integral membrane protein.
  
     0.426
Noca_1464
KEGG: tfu:Tfu_0510 hypothetical protein.
  
     0.406
Noca_1062
PFAM: protein of unknown function DUF1707; KEGG: sma:SAV5183 hypothetical protein.
 
     0.400
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.