STRINGSTRING
Noca_3162 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3162" - AzlC family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3162AzlC family protein (236 aa)    
Predicted Functional Partners:
Noca_3163
Branched-chain amino acid transport (100 aa)
 
          0.964
Noca_3161
Hypothetical protein (72 aa)
              0.775
Noca_0073
Helix-turn-helix domain-containing protein (210 aa)
 
        0.638
Noca_3160
N-acetyltransferase GCN5 (185 aa)
              0.625
Noca_1181
ABC transporter-like protein (270 aa)
   
   
    0.531
Noca_3014
Inner-membrane translocator (330 aa)
   
   
    0.529
Noca_3016
ABC transporter-like protein (260 aa)
   
   
    0.521
Noca_3015
ABC transporter-like protein (327 aa)
   
   
    0.518
Noca_3159
phenylacetate-CoA oxygenase subunit PaaA (306 aa)
              0.466
Noca_3158
phenylacetate-CoA oxygenase subunit PaaB (93 aa)
              0.466
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (11%) [HD]