STRINGSTRING
Noca_3168 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3168" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3168Hypothetical protein (171 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (247 aa)
              0.645
Noca_3170
Hypothetical protein (183 aa)
              0.644
Noca_3169
Hypothetical protein (198 aa)
              0.644
Noca_4682
Hypothetical protein (735 aa)
   
          0.626
Noca_4290
ATPase domain-containing protein (315 aa)
   
          0.620
Noca_0059
Extracellular solute-binding protein (439 aa)
   
          0.607
Noca_0128
Hypothetical protein (435 aa)
   
          0.593
Noca_4346
Helix-turn-helix, type 11 domain-containing protein (330 aa)
   
          0.536
Noca_0057
Hypothetical protein (482 aa)
   
          0.528
Noca_2941
Hypothetical protein (410 aa)
   
          0.512
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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