node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplM | rpmA | Noca_0889 | Noca_3450 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein L27; KEGG: sco:SCO2596 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.999 |
rplM | rpsB | Noca_0889 | Noca_3243 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein S2; KEGG: sco:SCO5624 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.998 |
rplM | rpsE | Noca_0889 | Noca_3888 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.999 |
rplM | rpsG | Noca_0889 | Noca_3924 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.998 |
rplM | rpsI | Noca_0889 | Noca_0890 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein S9; KEGG: pac:PPA1802 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
rplM | rpsK | Noca_0889 | Noca_3877 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
rplM | rpsO | Noca_0889 | Noca_3178 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.998 |
rplM | rpsP | Noca_0889 | Noca_3260 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein S16; KEGG: rha:RHA1_ro06535 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.996 |
rplM | rpsQ | Noca_0889 | Noca_3896 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.997 |
rplM | rpsS | Noca_0889 | Noca_3901 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |
rpmA | rplM | Noca_3450 | Noca_0889 | PFAM: ribosomal protein L27; KEGG: sco:SCO2596 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rpmA | rpsB | Noca_3450 | Noca_3243 | PFAM: ribosomal protein L27; KEGG: sco:SCO2596 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | PFAM: ribosomal protein S2; KEGG: sco:SCO5624 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.997 |
rpmA | rpsE | Noca_3450 | Noca_3888 | PFAM: ribosomal protein L27; KEGG: sco:SCO2596 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.995 |
rpmA | rpsG | Noca_3450 | Noca_3924 | PFAM: ribosomal protein L27; KEGG: sco:SCO2596 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.996 |
rpmA | rpsI | Noca_3450 | Noca_0890 | PFAM: ribosomal protein L27; KEGG: sco:SCO2596 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | PFAM: ribosomal protein S9; KEGG: pac:PPA1802 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.998 |
rpmA | rpsK | Noca_3450 | Noca_3877 | PFAM: ribosomal protein L27; KEGG: sco:SCO2596 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.995 |
rpmA | rpsO | Noca_3450 | Noca_3178 | PFAM: ribosomal protein L27; KEGG: sco:SCO2596 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.998 |
rpmA | rpsP | Noca_3450 | Noca_3260 | PFAM: ribosomal protein L27; KEGG: sco:SCO2596 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | PFAM: ribosomal protein S16; KEGG: rha:RHA1_ro06535 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.996 |
rpmA | rpsQ | Noca_3450 | Noca_3896 | PFAM: ribosomal protein L27; KEGG: sco:SCO2596 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.991 |
rpmA | rpsS | Noca_3450 | Noca_3901 | PFAM: ribosomal protein L27; KEGG: sco:SCO2596 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.996 |