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rimP protein (Nocardioides sp. JS614) - STRING interaction network
"rimP" - Hypothetical protein in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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Experiments
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Textmining
[Homology]
Score
rimPHypothetical protein; Required for maturation of 30S ribosomal subunits (175 aa)    
Predicted Functional Partners:
nusA
Transcription elongation factor NusA; Participates in both transcription termination and antitermination (327 aa)
   
   
  0.973
Noca_3191
Hypothetical protein (121 aa)
 
   
  0.852
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (938 aa)
   
   
  0.804
Noca_3195
Hypothetical protein (143 aa)
              0.662
rbfA
Ribosome-binding factor A; Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5’-terminal helix region of 16S rRNA (162 aa)
   
      0.653
rpsL
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy (124 aa)
     
 
  0.652
Noca_3194
Hypothetical protein (148 aa)
              0.647
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (289 aa)
   
   
  0.632
Noca_2447
Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (345 aa)
              0.622
Noca_3187
Riboflavin kinase/FMN adenylyltransferase (310 aa)
              0.553
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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