STRINGSTRING
Noca_3234 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3234" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3234Hypothetical protein (361 aa)    
Predicted Functional Partners:
Noca_3233
Hypothetical protein (240 aa)
              0.796
Noca_3235
Metallophosphoesterase (499 aa)
 
          0.675
Noca_0654
Hypothetical protein (522 aa)
   
          0.656
Noca_0473
Hypothetical protein (212 aa)
   
          0.642
Noca_1555
Hypothetical protein (509 aa)
   
          0.620
Noca_2672
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (508 aa)
   
          0.558
Noca_3701
Hypothetical protein (167 aa)
   
          0.525
Noca_3628
Hypothetical protein (151 aa)
   
          0.522
Noca_4428
Oxidoreductase (63 aa)
   
          0.512
Noca_2801
Hypothetical protein (73 aa)
   
          0.502
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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