STRINGSTRING
Noca_3269 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3269" - Ammonium transporter in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3269Ammonium transporter (441 aa)    
Predicted Functional Partners:
Noca_3268
Nitrogen regulatory protein P-II (112 aa)
 
  0.999
glnD
PII uridylyl-transferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism (707 aa)
 
     
  0.848
Noca_3022
Glutamate synthase (NADH) large subunit (1519 aa)
 
 
  0.819
Noca_3597
Response regulator receiver (131 aa)
   
 
  0.775
Noca_4562
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase (736 aa)
         
  0.737
Noca_2854
3-hydroxyacyl-CoA dehydrogenase (696 aa)
         
  0.737
Noca_4046
Response regulator receiver (225 aa)
   
  0.735
Noca_3695
Response regulator receiver (236 aa)
   
  0.735
Noca_2939
Response regulator receiver (232 aa)
   
  0.735
Noca_1613
Response regulator receiver (225 aa)
   
  0.735
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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