STRINGSTRING
Noca_3278 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3278" - Major facilitator transporter in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3278Major facilitator transporter (415 aa)    
Predicted Functional Partners:
Noca_3279
Hypothetical protein (501 aa)
              0.829
Noca_3277
FAD linked oxidase domain-containing protein (453 aa)
              0.805
Noca_4322
Major facilitator transporter (418 aa)
   
          0.623
Noca_0660
Hypothetical protein (106 aa)
   
          0.567
Noca_1196
Hypothetical protein (174 aa)
   
          0.542
Noca_0885
Major facilitator transporter (415 aa)
   
          0.525
Noca_3844
NUDIX hydrolase (152 aa)
   
          0.520
Noca_3341
CoA-binding domain-containing protein (155 aa)
   
          0.519
Noca_0967
PspC domain-containing protein (108 aa)
   
          0.510
Noca_0788
Penicillin amidase (872 aa)
   
          0.497
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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