STRINGSTRING
Noca_3309 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3309" - Peroxiredoxins-like protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3309Peroxiredoxins-like protein (192 aa)    
Predicted Functional Partners:
Noca_3310
Regulatory protein LuxR (512 aa)
 
          0.918
Noca_0588
Sugar ABC transporter periplasmic component-like protein (390 aa)
   
          0.710
Noca_2264
Phage integrase family protein (797 aa)
   
          0.701
Noca_2264
Phage integrase family protein (797 aa)
   
          0.701
Noca_4018
ABC-type branched-chain amino acid transport systems periplasmic component-like (481 aa)
   
          0.689
Noca_2142
Hypothetical protein (352 aa)
   
          0.686
Noca_1836
CdaR family transcriptional regulator (384 aa)
   
          0.646
Noca_3308
Type 11 methyltransferase (239 aa)
              0.642
Noca_3353
Hypothetical protein (146 aa)
   
          0.620
Noca_0099
Sugar ABC transporter periplasmic component-like protein (400 aa)
   
          0.604
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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