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Noca_3320 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3320" - ABC sugar transporter, periplasmic ligand binding protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3320ABC sugar transporter, periplasmic ligand binding protein (348 aa)    
Predicted Functional Partners:
Noca_3317
Inner-membrane translocator (364 aa)
 
   
    0.963
Noca_3318
Inner-membrane translocator (340 aa)
 
   
    0.960
Noca_0679
Sugar ABC transporter periplasmic component-like protein (387 aa)
   
 
  0.943
Noca_0404
Putative sugar ABC transporter, substrate-binding protein (368 aa)
   
 
  0.943
Noca_0806
Sugar ABC transporter periplasmic component-like protein (398 aa)
   
 
  0.938
Noca_3319
ABC transporter-like protein (499 aa)
 
 
  0.932
Noca_0075
Sugar ABC transporter periplasmic component-like protein (336 aa)
   
   
    0.932
Noca_0604
Sugar ABC transporter periplasmic component-like protein (391 aa)
   
   
    0.919
Noca_0099
Sugar ABC transporter periplasmic component-like protein (400 aa)
   
   
    0.911
Noca_0588
Sugar ABC transporter periplasmic component-like protein (390 aa)
         
    0.900
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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