STRINGSTRING
Noca_3349 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3349" - BioY protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3349BioY protein (207 aa)    
Predicted Functional Partners:
Noca_3351
Cobalt transport protein (204 aa)
 
   
  0.995
Noca_3350
ABC transporter-like protein (230 aa)
 
   
  0.995
Noca_3431
Cobalt transport protein (374 aa)
       
  0.889
Noca_3430
ABC transporter-like protein (530 aa)
       
  0.889
bioD
Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (281 aa)
       
  0.700
Noca_3348
TetR family transcriptional regulator (185 aa)
 
          0.698
Noca_3494
biotin--acetyl-CoA-carboxylase ligase (263 aa)
 
     
  0.633
Noca_1329
Cobalt ABC transporter, inner membrane subunit CbiQ (222 aa)
 
     
  0.550
Noca_1330
Cobalt ABC transporter ATPase (270 aa)
 
     
  0.539
Noca_4071
Thiolase (382 aa)
 
     
  0.518
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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