STRINGSTRING
Noca_3351 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3351" - Cobalt transport protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3351Cobalt transport protein (204 aa)    
Predicted Functional Partners:
Noca_3350
ABC transporter-like protein (230 aa)
 
  0.999
Noca_3349
BioY protein (207 aa)
 
   
  0.995
Noca_3430
ABC transporter-like protein (530 aa)
   
  0.905
Noca_1330
Cobalt ABC transporter ATPase (270 aa)
   
  0.905
Noca_3348
TetR family transcriptional regulator (185 aa)
 
          0.849
Noca_3409
Precorrin-3 methyltransferase / precorrin-2 C20-methyltransferase (526 aa)
   
   
  0.785
Noca_2892
Precorrin-3 methyltransferase / precorrin-2 C20-methyltransferase (507 aa)
   
   
  0.785
Noca_2890
precorrin-6Y C5,15-methyltransferase (398 aa)
   
   
  0.705
Noca_1327
Cobalamin (vitamin B12) biosynthesis protein CbiM (229 aa)
       
  0.697
Noca_2455
Hypothetical protein (184 aa)
 
          0.549
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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