STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3360PFAM: regulatory protein, TetR; KEGG: rha:RHA1_ro06435 possible transcriptional regulator, TetR family. (208 aa)    
Predicted Functional Partners:
Noca_3359
PFAM: NADPH-dependent FMN reductase; KEGG: sma:SAV7045 reductase.
 
   
 0.739
Noca_2194
PFAM: regulatory protein, TetR; KEGG: fal:FRAAL3510 putative TetR-family transcriptional regulator (partial match).
  
     0.511
Noca_3357
PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_0265 GCN5-related N-acetyltransferase.
       0.462
Noca_3358
PFAM: Amidase; KEGG: tfu:Tfu_2207 amidase; Belongs to the amidase family.
       0.462
Noca_3356
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: fal:FRAAL2466 putative short chain dehydrogenase.
       0.445
Noca_2043
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_4099 methyltransferase type 11.
  
 
   0.418
Noca_3503
PFAM: regulatory protein, TetR; KEGG: rha:RHA1_ro06635 transcriptional regulator, TetR family.
  
     0.415
Noca_1664
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0484 transcriptional regulator, TetR family.
  
     0.411
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.