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Noca_3380 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3380" - Short-chain dehydrogenase/reductase SDR in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3380Short-chain dehydrogenase/reductase SDR (240 aa)    
Predicted Functional Partners:
Noca_3379
Amino acid permease-associated protein (505 aa)
 
          0.890
Noca_3381
Short-chain dehydrogenase/reductase SDR (257 aa)
 
       
0.887
Noca_0427
Short chain dehydrogenase (270 aa)
 
          0.773
Noca_2741
Short chain dehydrogenase (293 aa)
 
          0.755
Noca_4089
Short-chain dehydrogenase/reductase SDR (234 aa)
 
          0.748
Noca_4120
Short-chain dehydrogenase/reductase SDR (310 aa)
 
          0.737
Noca_3383
Polysaccharide deacetylase (299 aa)
          0.730
Noca_1834
Short-chain dehydrogenase/reductase SDR (257 aa)
 
          0.729
Noca_3382
Agmatinase (321 aa)
 
          0.725
Noca_1466
Short-chain dehydrogenase/reductase SDR (253 aa)
   
          0.633
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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