STRINGSTRING
Noca_3444 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3444" - Methionine synthase, vitamin-B12 independent in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3444Methionine synthase, vitamin-B12 independent (338 aa)    
Predicted Functional Partners:
Noca_3629
O-acetylhomoserine/O-acetylserine sulfhydrylase (428 aa)
         
    0.960
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (396 aa)
         
    0.960
ahcY
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (476 aa)
         
    0.960
Noca_3446
Class V aminotransferase (399 aa)
 
        0.928
mnmA
tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 (366 aa)
 
        0.896
Noca_3138
ErfK/YbiS/YcfS/YnhG family protein (402 aa)
   
          0.749
Noca_3443
PfpI family intracellular peptidase (178 aa)
              0.712
Noca_3198
N-acetyltransferase GCN5 (281 aa)
   
        0.709
prcA
20S proteasome, A and B subunits; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (255 aa)
   
          0.707
Noca_2651
Hypothetical protein (330 aa)
   
        0.700
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (8%) [HD]