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Noca_3459 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3459" - Radical SAM domain-containing protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3459Radical SAM domain-containing protein (663 aa)    
Predicted Functional Partners:
Noca_3453
Hypothetical protein (236 aa)
          0.985
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (345 aa)
         
  0.948
Noca_3464
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape (302 aa)
 
        0.780
Noca_1736
Hypothetical protein (58 aa)
   
          0.750
Noca_3461
Rod shape-determining protein RodA (413 aa)
              0.715
Noca_3462
Peptidoglycan glycosyltransferase (708 aa)
              0.704
Noca_3465
Rod shape-determining protein MreB (342 aa)
   
        0.698
Noca_3452
Ribonuclease G (1070 aa)
       
    0.659
Noca_3460
Hypothetical protein (66 aa)
              0.612
Noca_3463
Rod shape-determining protein (170 aa)
              0.514
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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