STRINGSTRING
Noca_3478 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3478" - Cyclase/dehydrase in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3478Cyclase/dehydrase (160 aa)    
Predicted Functional Partners:
Noca_3479
PGAP1 family protein (378 aa)
              0.859
Noca_2519
Hypothetical protein (100 aa)
   
          0.736
Noca_4522
Hypothetical protein (284 aa)
   
          0.704
Noca_4553
Activator of Hsp90 ATPase 1 family protein (161 aa)
   
          0.700
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase (471 aa)
              0.686
Noca_1372
Regulatory protein TetR (193 aa)
   
          0.664
Noca_4049
Hypothetical protein (199 aa)
   
          0.651
Noca_4417
Nuclear transport factor 2 (150 aa)
   
          0.638
Noca_4288
Thioesterase superfamily protein (229 aa)
   
          0.584
Noca_3477
ClpP1 peptidase; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (195 aa)
              0.573
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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