STRINGSTRING
Noca_3507 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3507" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3507Hypothetical protein (93 aa)    
Predicted Functional Partners:
Noca_3508
Regulatory protein TetR (200 aa)
              0.731
Noca_3509
Hypothetical protein (407 aa)
              0.564
Noca_2264
Phage integrase family protein (797 aa)
   
          0.558
Noca_2264
Phage integrase family protein (797 aa)
   
          0.558
Noca_3277
FAD linked oxidase domain-containing protein (453 aa)
 
            0.530
Noca_3506
butyryl-CoA dehydrogenase (399 aa)
              0.480
Noca_1187
Antibiotic biosynthesis monooxygenase (97 aa)
   
          0.444
Noca_2506
Hypothetical protein (239 aa)
   
          0.428
Noca_3505
GtrA family protein (192 aa)
              0.404
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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