STRINGSTRING
Noca_3522 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3522" - TetR family transcriptional regulator in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3522TetR family transcriptional regulator (222 aa)    
Predicted Functional Partners:
Noca_3523
NAD-dependent epimerase/dehydratase (277 aa)
              0.859
Noca_3521
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate (273 aa)
              0.850
Noca_3524
Aldo/keto reductase (334 aa)
              0.752
Noca_4010
Hypothetical protein (148 aa)
   
          0.592
Noca_3520
Hypothetical protein (314 aa)
              0.537
Noca_1230
Hypothetical protein (295 aa)
   
          0.425
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (9%) [HD]