STRINGSTRING
Noca_3559 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3559" - N-acetyltransferase GCN5 in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3559N-acetyltransferase GCN5 (218 aa)    
Predicted Functional Partners:
Noca_2177
N-acetyltransferase GCN5 (200 aa)
   
          0.747
Noca_4637
N-acetyltransferase GCN5 (193 aa)
   
          0.739
Noca_3558
Endoglycoceramidase (490 aa)
              0.647
trpS
tryptophanyl-tRNA synthetase (352 aa)
              0.488
Noca_3556
2’,5’ RNA ligase (179 aa)
              0.479
Noca_3555
Hypothetical protein (616 aa)
              0.425
Noca_3554
Hypothetical protein (340 aa)
              0.425
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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