STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3579KEGG: nfa:nfa19270 hypothetical protein. (229 aa)    
Predicted Functional Partners:
Noca_3580
KEGG: nfa:nfa19270 hypothetical protein.
       0.773
Noca_3581
KEGG: tfu:Tfu_2569 putative integral membrane protein.
       0.675
folD2
Methenyltetrahydrofolate cyclohydrolase / 5,10-methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.675
purH
KEGG: sma:SAV3444 putative bifunctional purine biosynthesis protein; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme, formylation region.
       0.621
Noca_2168
KEGG: mmc:Mmcs_3184 hypothetical protein.
  
     0.508
Noca_1475
Hypothetical protein.
  
     0.480
Noca_1232
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro06221 possible dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.464
Noca_2519
KEGG: mmc:Mmcs_4641 hypothetical protein.
  
     0.455
Noca_3479
PFAM: PGAP1 family protein; KEGG: rha:RHA1_ro05901 hypothetical protein.
  
     0.447
Noca_1730
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1257 transcriptional regulator, TetR family.
  
     0.436
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.