STRINGSTRING
Noca_3621 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3621" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3621Hypothetical protein (146 aa)    
Predicted Functional Partners:
Noca_3622
Hypothetical protein (47 aa)
              0.686
Noca_3620
Putative phosphoketolase (798 aa)
              0.640
Noca_0906
Hypothetical protein (189 aa)
   
          0.639
Noca_2197
Alkylmercury lyase (317 aa)
   
          0.593
Noca_4674
Alanine racemase domain-containing protein (351 aa)
   
          0.581
Noca_3170
Hypothetical protein (183 aa)
   
          0.547
Noca_0518
Peptidoglycan binding domain-containing protein (309 aa)
   
          0.510
Noca_3958
Hypothetical protein (118 aa)
   
          0.502
Noca_4673
Methicillin resistance protein (383 aa)
   
          0.496
Noca_0795
Hypothetical protein (272 aa)
   
          0.493
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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