STRINGSTRING
Noca_3628 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3628" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3628Hypothetical protein (151 aa)    
Predicted Functional Partners:
Noca_3724
Putative phosphodiesterase (222 aa)
 
          0.907
Noca_0965
FAD dependent oxidoreductase (528 aa)
 
          0.738
Noca_0356
Hypothetical protein (125 aa)
   
          0.654
Noca_1976
Hypothetical protein (71 aa)
   
          0.648
Noca_1657
Hypothetical protein (419 aa)
   
          0.618
Noca_1892
Aminoglycoside/hydroxyurea antibiotic resistance kinase (303 aa)
   
          0.575
Noca_4619
Hypothetical protein (168 aa)
   
          0.567
Noca_2592
Hypothetical protein (140 aa)
   
          0.544
Noca_3832
Hypothetical protein (64 aa)
   
          0.541
Noca_2705
CHAD domain-containing protein (492 aa)
   
          0.530
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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