STRINGSTRING
Noca_3636 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3636" - Aminoglycoside phosphotransferase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3636Aminoglycoside phosphotransferase (375 aa)    
Predicted Functional Partners:
Noca_3635
Hypothetical protein (373 aa)
 
          0.971
Noca_1832
acyl-CoA dehydrogenase domain-containing protein (411 aa)
        0.902
Noca_3866
acyl-CoA dehydrogenase domain-containing protein (407 aa)
        0.900
Noca_4130
acyl-CoA dehydrogenase domain-containing protein (437 aa)
        0.889
Noca_4562
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase (736 aa)
   
 
    0.792
Noca_2854
3-hydroxyacyl-CoA dehydrogenase (696 aa)
   
 
    0.792
Noca_3634
Aldehyde dehydrogenase (480 aa)
   
        0.778
Noca_1831
Aminoglycoside phosphotransferase (451 aa)
   
          0.766
Noca_0426
Dihydrodipicolinate reductase (373 aa)
   
          0.752
Noca_4369
Hypothetical protein (146 aa)
   
          0.723
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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