STRINGSTRING
Noca_3673 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3673" - Lipoprotein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3673Lipoprotein (324 aa)    
Predicted Functional Partners:
Noca_3672
Protoporphyrinogen oxidase (460 aa)
         
  0.683
Noca_3671
Chlorite dismutase (240 aa)
              0.497
Noca_2313
Luciferase family protein (316 aa)
   
          0.451
Noca_3006
DNA polymerase I (889 aa)
              0.450
Noca_1817
Hypothetical protein (497 aa)
   
          0.446
Noca_3907
Hypothetical protein (362 aa)
   
          0.421
Noca_4685
RNA polymerase sigma factor SigM (233 aa)
              0.408
Noca_1706
Sigma-70 region 2 domain-containing protein (217 aa)
              0.408
Noca_3956
Hypothetical protein (86 aa)
   
          0.402
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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