STRINGSTRING
Noca_3675 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3675" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3675Hypothetical protein (209 aa)    
Predicted Functional Partners:
Noca_3676
3’-5’ exonuclease (442 aa)
 
          0.921
Noca_3671
Chlorite dismutase (240 aa)
 
          0.773
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (345 aa)
   
        0.771
Noca_1984
Hypothetical protein (172 aa)
   
          0.761
Noca_2710
Regulatory protein MerR (198 aa)
   
          0.751
Noca_1888
DNA polymerase III subunit delta (330 aa)
   
        0.691
Noca_3991
Hypothetical protein (97 aa)
   
        0.684
Noca_4562
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase (736 aa)
       
    0.662
Noca_2854
3-hydroxyacyl-CoA dehydrogenase (696 aa)
       
    0.662
Noca_3055
DivIVA family protein (247 aa)
   
          0.655
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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