STRINGSTRING
Noca_3709 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3709" - Peptidase S15 in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3709Peptidase S15 (519 aa)    
Predicted Functional Partners:
Noca_3710
Exopolysaccharide biosynthesis protein-like (420 aa)
 
          0.832
Noca_2197
Alkylmercury lyase (317 aa)
   
          0.758
Noca_0366
Type II secretion system protein (240 aa)
   
          0.730
Noca_4631
Glycoside hydrolase 15-like protein (386 aa)
   
          0.705
Noca_1817
Hypothetical protein (497 aa)
   
          0.677
Noca_0365
Type II secretion system protein (258 aa)
   
          0.654
Noca_1555
Hypothetical protein (509 aa)
   
          0.600
Noca_3002
Polysaccharide biosynthesis protein (435 aa)
   
          0.598
Noca_3126
Hypothetical protein (425 aa)
   
          0.593
Noca_1427
Hypothetical protein (342 aa)
   
          0.574
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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