STRINGSTRING
Noca_3721 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3721" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3721Hypothetical protein (126 aa)    
Predicted Functional Partners:
Noca_1644
Hypothetical protein (106 aa)
   
          0.763
Noca_3722
Gluconate kinase (160 aa)
              0.619
Noca_3724
Putative phosphodiesterase (222 aa)
              0.610
Noca_3723
Hypothetical protein (217 aa)
              0.610
egtD
Hypothetical protein; Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine (332 aa)
 
          0.573
Noca_3725
Hypothetical protein (172 aa)
              0.522
Noca_3726
acyl-CoA dehydrogenase domain-containing protein (383 aa)
 
          0.503
Noca_1640
Hypothetical protein (433 aa)
 
          0.488
Noca_3727
acyl-CoA dehydrogenase domain-containing protein (378 aa)
 
          0.470
Noca_2772
Cupin (178 aa)
 
          0.438
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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