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Noca_3753 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3753" - 23S rRNA methyluridine methyltransferase in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_375323S rRNA methyluridine methyltransferase (379 aa)    
Predicted Functional Partners:
Noca_3752
Putative suppressor protein DnaK (110 aa)
              0.859
Noca_2443
Fmu (Sun) domain-containing protein (472 aa)
 
 
  0.715
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (268 aa)
   
   
  0.713
Noca_0939
Cystathionine beta-synthase (462 aa)
   
      0.686
Noca_4307
Cysteine synthase (309 aa)
   
      0.640
Noca_1627
Pyridoxal-5’-phosphate-dependent enzyme subunit beta (507 aa)
   
      0.640
Noca_1312
Cysteine synthase (320 aa)
   
      0.640
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (297 aa)
   
 
  0.616
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (276 aa)
   
      0.596
Noca_3128
Hypothetical protein (601 aa)
 
        0.581
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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