STRINGSTRING
Noca_3805 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3805" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3805Hypothetical protein (233 aa)    
Predicted Functional Partners:
Noca_1365
Putative integral membrane protein (377 aa)
   
          0.669
Noca_1058
Secreted protein (222 aa)
   
          0.668
Noca_3806
ERCC4 domain-containing protein (330 aa)
              0.587
Noca_3807
Cysteine desulfurase (399 aa)
              0.551
Noca_2173
Regulatory protein TetR (200 aa)
   
          0.547
Noca_2806
ABC transporter-like protein (1185 aa)
   
          0.521
Noca_3985
GDSL family lipase (298 aa)
   
          0.511
Noca_1597
GtrA family protein (154 aa)
   
          0.501
Noca_3724
Putative phosphodiesterase (222 aa)
   
          0.489
Noca_3610
YbaK/prolyl-tRNA synthetase associated domain-containing protein (180 aa)
   
          0.489
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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