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Noca_3806 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3806" - ERCC4 domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3806ERCC4 domain-containing protein (330 aa)    
Predicted Functional Partners:
Noca_3807
Cysteine desulfurase (399 aa)
              0.801
Noca_1766
Transposase, IS204/IS1001/IS1096/IS1165 family protein (432 aa)
   
          0.744
Noca_3434
Transposase, IS204/IS1001/IS1096/IS1165 family protein (432 aa)
   
          0.744
Noca_2875
Transposase, IS204/IS1001/IS1096/IS1165 family protein (432 aa)
   
          0.744
Noca_2515
Transposase, IS204/IS1001/IS1096/IS1165 family protein (432 aa)
   
          0.744
Noca_1766
Transposase, IS204/IS1001/IS1096/IS1165 family protein (432 aa)
   
          0.744
Noca_3808
Hypothetical protein (331 aa)
              0.655
Noca_2680
Plasmid stabilization system protein (98 aa)
   
          0.644
Noca_2025
Hypothetical protein (240 aa)
   
          0.633
Noca_3805
Hypothetical protein (233 aa)
              0.587
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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