STRINGSTRING
Noca_3819 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3819" - Alkaline phosphatase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3819Alkaline phosphatase (523 aa)    
Predicted Functional Partners:
Noca_3354
GTP cyclohydrolase (219 aa)
       
    0.901
Noca_0445
GTP cyclohydrolase I (205 aa)
       
    0.901
Noca_1099
Putative 6-pyruvoyl tetrahydropterin synthase (118 aa)
         
    0.900
Noca_0447
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin (128 aa)
         
    0.900
Noca_3820
Type I phosphodiesterase/nucleotide pyrophosphatase (398 aa)
 
          0.761
Noca_3822
Hypothetical protein (490 aa)
              0.562
Noca_3821
Hypothetical protein (175 aa)
              0.562
Noca_3823
Hypothetical protein (529 aa)
              0.488
Noca_3818
Integral membrane protein (315 aa)
              0.475
Noca_1883
Hypothetical protein (702 aa)
 
        0.460
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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