STRINGSTRING
Noca_3824 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3824" - Helicase c2 in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3824Helicase c2 (676 aa)    
Predicted Functional Partners:
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (110 aa)
   
  0.898
Noca_3006
DNA polymerase I (889 aa)
     
  0.864
Noca_1291
Type III restriction enzyme, res subunit (598 aa)
   
  0.850
Noca_3947
Helicase domain-containing protein (546 aa)
     
  0.830
Noca_3809
Type III restriction enzyme, res subunit (1033 aa)
     
  0.830
Noca_2280
Type III restriction enzyme, res subunit (558 aa)
     
  0.830
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (338 aa)
     
    0.793
Noca_0387
DNA polymerase III subunit delta’ (385 aa)
   
  0.756
Noca_0002
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (408 aa)
     
  0.736
Noca_4663
Single-strand binding protein (188 aa)
 
 
 
  0.702
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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