STRINGSTRING
Noca_3857 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3857" - Transglycosylase domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3857Transglycosylase domain-containing protein (387 aa)    
Predicted Functional Partners:
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol (297 aa)
   
   
  0.795
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (297 aa)
   
   
  0.788
Noca_3854
ABC transporter-like protein (611 aa)
              0.781
Noca_3858
TatD family hydrolase (275 aa)
   
        0.683
Noca_2717
Hypothetical protein (286 aa)
   
          0.639
Noca_1395
Cell envelope-related transcriptional attenuator (404 aa)
   
          0.607
Noca_1223
Hypothetical protein (163 aa)
   
          0.606
Noca_0021
Hypothetical protein (273 aa)
   
          0.600
Noca_2716
Hypothetical protein (110 aa)
   
          0.587
Noca_1994
Hypothetical protein (147 aa)
   
        0.560
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (7%) [HD]