STRINGSTRING
Noca_3859 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3859" - Alpha/beta hydrolase fold protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3859Alpha/beta hydrolase fold protein (278 aa)    
Predicted Functional Partners:
rsmI
uroporphyrin-III C/tetrapyrrole methyltransferase; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (280 aa)
              0.859
Noca_3858
TatD family hydrolase (275 aa)
              0.859
Noca_3861
Glycosyl transferase family protein (541 aa)
              0.649
Noca_3427
Alpha/beta hydrolase fold protein (304 aa)
   
          0.526
Noca_3857
Transglycosylase domain-containing protein (387 aa)
              0.489
Noca_3562
Cytochrome P450 (451 aa)
   
          0.455
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (297 aa)
              0.400
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol (297 aa)
              0.400
Noca_3854
ABC transporter-like protein (611 aa)
              0.400
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (17%) [HD]