STRINGSTRING
Noca_3862 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3862" - Regulatory protein TetR in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3862Regulatory protein TetR (202 aa)    
Predicted Functional Partners:
Noca_3863
3-ketoacyl-ACP reductase (250 aa)
 
          0.701
Noca_3865
Aminoglycoside phosphotransferase (350 aa)
              0.659
Noca_3866
acyl-CoA dehydrogenase domain-containing protein (407 aa)
              0.659
Noca_3864
Short-chain dehydrogenase/reductase SDR (272 aa)
              0.654
Noca_4603
Hypothetical protein (95 aa)
   
          0.505
Noca_2765
Regulatory protein TetR (210 aa)
   
          0.443
Noca_3958
Hypothetical protein (118 aa)
   
          0.424
Noca_3867
Alpha/beta hydrolase domain-containing protein (310 aa)
              0.410
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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