STRINGSTRING
Noca_3911 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3911" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3911Hypothetical protein (430 aa)    
Predicted Functional Partners:
Noca_3909
Secreted protein (371 aa)
 
        0.977
Noca_3907
Hypothetical protein (362 aa)
 
          0.974
Noca_3910
ATPase (332 aa)
 
   
  0.965
Noca_3908
Integral membrane protein (207 aa)
 
          0.960
Noca_3912
Integral membrane protein (331 aa)
 
   
  0.867
Noca_3913
RDD domain-containing protein (269 aa)
 
        0.867
Noca_1478
ATPase (340 aa)
 
   
  0.529
Noca_4558
RDD domain-containing protein (272 aa)
 
          0.493
Noca_3073
ATPase (324 aa)
   
   
  0.462
Noca_3975
ATPase (294 aa)
         
  0.447
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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