STRINGSTRING
Noca_3917 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3917" - Beta-glucosidase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3917Beta-glucosidase (455 aa)    
Predicted Functional Partners:
Noca_3501
Cellulase (346 aa)
   
 
  0.959
Noca_4617
Cellulase (341 aa)
   
 
  0.958
Noca_0775
Alpha amylase (534 aa)
 
 
  0.951
Noca_0056
Glycosyl hydrolase family 32 protein (415 aa)
   
   
  0.918
Noca_3263
Beta-glucosidase (678 aa)
 
   
  0.871
Noca_4587
Beta-glucosidase (465 aa)
   
   
 
0.813
Noca_3918
LacI family transcriptional regulator (351 aa)
         
  0.808
Noca_3483
Ribose-5-phosphate isomerase B (162 aa)
   
 
  0.633
Noca_4665
Protein kinase (307 aa)
       
  0.568
Noca_4496
Protein kinase (488 aa)
       
  0.568
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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