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Noca_3927 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3927" - Regulatory protein MarR in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3927Regulatory protein MarR (156 aa)    
Predicted Functional Partners:
Noca_3926
Major facilitator transporter (457 aa)
 
     
  0.889
Noca_3928
Xanthine/uracil/vitamin C permease (491 aa)
              0.740
Noca_0492
Glutaredoxin (81 aa)
   
          0.637
Noca_2630
Hypothetical protein (282 aa)
   
          0.615
Noca_3991
Hypothetical protein (97 aa)
   
        0.589
rpsL
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy (124 aa)
         
  0.512
rpsG
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (156 aa)
              0.507
Noca_1308
Hypothetical protein (194 aa)
   
          0.477
Noca_3929
Integral membrane protein (78 aa)
              0.466
Noca_3664
Regulatory protein LuxR (215 aa)
     
 
  0.466
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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