STRINGSTRING
Noca_3954 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3954" - Nuclear transport factor 2 in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3954Nuclear transport factor 2 (124 aa)    
Predicted Functional Partners:
Noca_2780
3-ketosteroid-delta-1-dehydrogenase (564 aa)
 
   
    0.940
Noca_2774
Glyoxalase/bleomycin resistance protein/dioxygenase (300 aa)
   
          0.752
Noca_0302
Hypothetical protein (163 aa)
   
          0.735
Noca_2518
Rieske (2Fe-2S) domain-containing protein (398 aa)
 
     
  0.719
Noca_0207
Glyoxalase/bleomycin resistance protein/dioxygenase (305 aa)
   
          0.694
Noca_2789
Hypothetical protein (177 aa)
   
          0.649
Noca_3955
Hypothetical protein (201 aa)
              0.645
Noca_4373
Hypothetical protein (386 aa)
   
          0.639
Noca_0296
Hypothetical protein (493 aa)
   
          0.638
Noca_4371
Hypothetical protein (383 aa)
   
          0.635
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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