STRINGSTRING
Noca_3955 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3955" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3955Hypothetical protein (201 aa)    
Predicted Functional Partners:
Noca_3956
Hypothetical protein (86 aa)
          0.886
Noca_3954
Nuclear transport factor 2 (124 aa)
              0.645
Noca_3492
Adenylate cyclase (335 aa)
   
        0.531
Noca_0164
Adenylyl cyclase class-3/4/guanylyl cyclase (371 aa)
   
        0.446
Noca_2598
NADPH-dependent FMN reductase (199 aa)
   
        0.427
Noca_1366
Putative ABC transporter (572 aa)
   
          0.400
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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