STRINGSTRING
Noca_3956 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3956" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3956Hypothetical protein (86 aa)    
Predicted Functional Partners:
Noca_3955
Hypothetical protein (201 aa)
          0.886
Noca_3957
CutC family protein (247 aa)
              0.859
Noca_3958
Hypothetical protein (118 aa)
 
          0.773
Noca_2568
Hypothetical protein (73 aa)
   
          0.655
Noca_3085
Hypothetical protein (140 aa)
   
          0.643
Noca_2905
Hypothetical protein (238 aa)
   
          0.578
Noca_1214
Putative signal peptide (224 aa)
   
          0.574
Noca_0012
Hypothetical protein (270 aa)
   
          0.563
Noca_0266
Lipoprotein (234 aa)
   
          0.552
Noca_3481
Stage II sporulation E family protein (367 aa)
   
          0.517
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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