STRINGSTRING
Noca_3957 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3957" - CutC family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3957CutC family protein (247 aa)    
Predicted Functional Partners:
Noca_3956
Hypothetical protein (86 aa)
              0.859
Noca_3958
Hypothetical protein (118 aa)
              0.650
Noca_0083
Hypothetical protein (112 aa)
   
          0.536
Noca_4483
Glucosamine-6-phosphate isomerase (261 aa)
 
        0.494
Noca_1427
Hypothetical protein (342 aa)
   
          0.479
Noca_4635
ROK family protein (401 aa)
 
          0.438
Noca_1414
Ornithine cyclodeaminase (317 aa)
   
          0.425
Noca_0084
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (488 aa)
   
          0.422
Noca_4484
N-acetylglucosamine 6-phosphate deacetylase (318 aa)
              0.408
Noca_3109
Glucokinase (313 aa)
              0.408
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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