STRINGSTRING
Noca_3964 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3964" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3964Hypothetical protein (322 aa)    
Predicted Functional Partners:
Noca_2686
Hypothetical protein (145 aa)
 
          0.649
Noca_4619
Hypothetical protein (168 aa)
   
          0.587
Noca_1070
DNA binding domain-containing protein (130 aa)
   
          0.585
Noca_1511
Hypothetical protein (264 aa)
   
          0.576
Noca_1336
Putative ribonuclease BN (377 aa)
 
          0.549
Noca_4369
Hypothetical protein (146 aa)
   
          0.544
Noca_4232
Putative thioredoxin (170 aa)
   
          0.524
Noca_3965
LemA family protein (187 aa)
              0.487
Noca_3628
Hypothetical protein (151 aa)
 
          0.473
Noca_3618
MMPL domain-containing protein (712 aa)
   
          0.443
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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