STRINGSTRING
Noca_3981 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3981" - Transcriptional regulator in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3981Transcriptional regulator (231 aa)    
Predicted Functional Partners:
Noca_3980
Hemerythrin HHE cation binding domain-containing protein (279 aa)
 
          0.896
Noca_2102
Hypothetical protein (378 aa)
 
          0.848
Noca_2101
Multicopper oxidase, type 3 (911 aa)
 
          0.847
Noca_3352
Putative transcriptional regulator (228 aa)
   
          0.588
Noca_1348
Respiratory nitrate reductase chaperone NarJ (236 aa)
 
          0.507
Noca_2525
Rieske (2Fe-2S) domain-containing protein (122 aa)
 
          0.495
Noca_4302
Hemerythrin HHE cation binding domain-containing protein (168 aa)
   
          0.478
Noca_3979
C4-dicarboxylate transporter/malic acid transport protein (352 aa)
   
          0.446
Noca_1661
Hypothetical protein (110 aa)
 
        0.437
Noca_3156
phenylacetate-CoA oxygenase subunit PaaJ (161 aa)
   
   
  0.423
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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