STRINGSTRING
Noca_3996 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3996" - Major facilitator transporter in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3996Major facilitator transporter (443 aa)    
Predicted Functional Partners:
Noca_3997
Pyridoxal-dependent decarboxylase (516 aa)
 
          0.970
Noca_3995
Alpha/beta hydrolase fold protein (465 aa)
              0.596
Noca_2607
Galactokinase (399 aa)
 
 
 
  0.577
Noca_4371
Hypothetical protein (383 aa)
   
          0.504
Noca_3263
Beta-glucosidase (678 aa)
 
          0.493
Noca_3605
Integral membrane protein (118 aa)
   
          0.475
Noca_3994
Alpha,alpha-trehalose-phosphate synthase (482 aa)
              0.455
Noca_2266
Hypothetical protein (313 aa)
   
          0.453
Noca_4373
Hypothetical protein (386 aa)
   
          0.451
Noca_4587
Beta-glucosidase (465 aa)
 
        0.442
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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