STRINGSTRING
Noca_4010 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4010" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4010Hypothetical protein (148 aa)    
Predicted Functional Partners:
Noca_4009
Short-chain dehydrogenase/reductase SDR (240 aa)
              0.703
Noca_3208
Hypothetical protein (79 aa)
   
          0.665
Noca_4288
Thioesterase superfamily protein (229 aa)
   
          0.658
Noca_4011
Hypothetical protein (401 aa)
              0.649
Noca_2785
Hypothetical protein (263 aa)
   
          0.594
Noca_3522
TetR family transcriptional regulator (222 aa)
   
          0.592
Noca_3625
Luciferase-like protein (202 aa)
   
          0.553
Noca_0940
Hypothetical protein (153 aa)
   
          0.540
Noca_2581
Nitroreductase (236 aa)
   
          0.503
Noca_4132
Hypothetical protein (149 aa)
   
          0.486
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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